Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946707.1_cds_XP_016488735.1_79337
CDS Infomation

[gene=LOC107808710] [db_xref=GeneID:107808710] [protein=plant intracellular Ras-group-related LRR protein 6-like isoform X2] [protein_id=XP_016488735.1] [location=join(2263..2327,4548..4611,4718..4854,4966..5052,5130..5205,7680..7754,7854..7923,8018..8095,8218..8278,8410..8488,8698..8788,9117..9177,9277..9344,9430..9491,10166..10303,10781..10885,11998..12122,12204..12300,12381..12455,13233..13288,13910..13985)] [gbkey=CDS]
Sequence

ATGGATCGAGTCCTGAAAGCTGCGAGAACTTCCGGTTCTCTCAACTTATCAAATCGCTCT
CTCAGTGAGGTGCCCAATGATGTATACAAAAGTTTGGATGCAGCCAGCGAGGACGAGAAG
TGGTGGGAGGCCGTGGAACTACAGAAGCTGATTTTGGCTCATAATGACATAGAAACATTG
AAGGAAGATCTTCGAAATTTACCTCTACTGTCAGTGCTTAATGTTAGTCACAACAAGCTA
ACCTGTCTTCCAGCTGCTATTGGAGAGCTTCACATGCTAAAGTCCTTAGATGTATCATTT
AACTTGATCGTGAACATTCCAGAAGAGATCGGAACAGCAGCTTCTCTAGTCAAGTTTGAT
TGTTCAAACAACAAACTAAATGATCTCCCTAACTCCCTTGGAGGATGTGTGGAGTTATCA
GATCTCAAGGCATCAAACAATAGCATTTCCAGTTTGCCAGGAGATCTAGCAAAGTGTTCA
AAATTAACAAAGTTGGATGTTGAGGGAAACAAGTTAACTCTGCTACCTGAGAGTTTGATT
GCATCATGCAGAATGCTTACTGAACTCAATGCATCGAAAAACTTGCTCAATAACATTCCA
GAGAATATAGGAAGCCTTTCACGCTTGATTCGCCTAGACCTTCATCAGAACAGAATTTCA
TCAATTCCATCCTCAATAAAGGATTGCTCATCTCTTTTGGAGTTTTATATCGGGAATAAT
GCGCTTGCTTCATTACCTGTGGAGATAGGTGCACTTAATAGATTGGGGATATTTGATCTC
CACTCAAACCAGTTAAAGGAGTACCCAGTGGAGGCATGTAAATTGCAACTTTCAATGCTG
GACTTATCTAACAACTCATTGTCTGGATTGCCTCCAGAGATTGGCTTAATGACAACTTTG
CGGAAGCTTCTGCTTATTGGCAACCCTATTAGAACACTTCGGAGCTCGTTGGTAAACGGA
CCTACACCTGCTCTATTAAAATTTCTTCGAAGTAGAATTCCAACTGATGAAGCTGCTACG
CCCGGAAAGGAGGATGTTATTGCCATGGCAGCTAGGCTGTCCCTGTCTTCAAAGGAGCTT
TCTTTAGGAGGGCTTGGTTTGACTGCTGTCCCTTCAGATGTCTGGAAGTCACGAGACATC
TCAAAATGTGATCTTTCAGGGAACTCAATCGAAGAACTTCCTCTTGAACTTTGCTCTTGT
ATTTCCTTGGAGGCTCTCATTTTATCCAAAAACAAGATAAAAGATTGGCCCGGTTCAGTC
TTAACATCTCTTCCTGCACTTACATGTTTGAAGCTAGACAATAACCCCCTCAGACAGATA
CCATCCTCTGCCTTTCAAGCTGTATCCAAGCTTCAGATTTTGGATCTGAGTGGAAACATA
GGTTCTTTACCAGAGCATCCCGCATTTTCTTGCCTACCAGAGTTGCAAGAGCTTTATTTG
AGAAGGATGCAAATATCTATTTTCCCAAGTGATATAATTAACTTAAAGCAGTTACGACTT
CTTGATTTGAGCCAAAATTCCCTTCAATCAATTCCACAGGGTATAGTAAACTTGGGTTCT
CTTGCGGAACTTGACCTGTCAGACAATAACATTTCTTCTCTTCCACCAGAATTGGGTTTG
CTTGAACCTAGTCTGCAGGTGCTAAGACTGGACGGTAACCCACTTCGAAGCATCCGAAGG
CCCATTTTGGATCGAGGAACAAAAGCTGTTTTGAAGTACTTGAAGGAGAGAATTGTGGAG
CATTAG

Peptide Sequence

PEP ID

XP_016488735.1
PEP Infomation

PREDICTED: plant intracellular Ras-group-related LRR protein 6-like isoform X2 [Nicotiana tabacum]
Sequence

MDRVLKAARTSGSLNLSNRSLSEVPNDVYKSLDAASEDEKWWEAVELQKLILAHNDIETL
KEDLRNLPLLSVLNVSHNKLTCLPAAIGELHMLKSLDVSFNLIVNIPEEIGTAASLVKFD
CSNNKLNDLPNSLGGCVELSDLKASNNSISSLPGDLAKCSKLTKLDVEGNKLTLLPESLI
ASCRMLTELNASKNLLNNIPENIGSLSRLIRLDLHQNRISSIPSSIKDCSSLLEFYIGNN
ALASLPVEIGALNRLGIFDLHSNQLKEYPVEACKLQLSMLDLSNNSLSGLPPEIGLMTTL
RKLLLIGNPIRTLRSSLVNGPTPALLKFLRSRIPTDEAATPGKEDVIAMAARLSLSSKEL
SLGGLGLTAVPSDVWKSRDISKCDLSGNSIEELPLELCSCISLEALILSKNKIKDWPGSV
LTSLPALTCLKLDNNPLRQIPSSAFQAVSKLQILDLSGNIGSLPEHPAFSCLPELQELYL
RRMQISIFPSDIINLKQLRLLDLSQNSLQSIPQGIVNLGSLAELDLSDNNISSLPPELGL
LEPSLQVLRLDGNPLRSIRRPILDRGTKAVLKYLKERIVEH

Transcript Sequence

Gene sequence data has not been registered.